Conference article

Interactive 4D MRI blood flow exploration and analysis using line predicates

Jochen Jankowai
Department of Science and Technology, University of Linköping, Sweden

Rickard Englund
Department of Science and Technology, University of Linköping, Sweden

Timo Ropinski
Department of Science and Technology, University of Linköping, Sweden / Institute of Media Informatics, Ulm University, Germany

Ingrid Hotz
Department of Science and Technology, University of Linköping, Sweden

Download article

Published in: Proceedings of SIGRAD 2016, May 23rd and 24th, Visby, Sweden

Linköping Electronic Conference Proceedings 127:6, p. 35-42

Show more +

Published: 2016-05-30

ISBN: 978-91-7685-731-1

ISSN: 1650-3686 (print), 1650-3740 (online)

Abstract

We present an interactive exploration tool for 4D PC-MRI blood flow data that incorporates established rendering and filtering methods and combine them into one application. These methods include advanced line illumination, interactively adjustable spatial context visualization and blood flow analysis using line predicates.

Keywords

4D MRI blood flow visualization Line predicates Line illumination Spatial context visualization

References

[Ban94] BANKS D. C.: Illumination in Diverse Codimensions. In Proceedings of the 21st Annual Conference on Computer Graphics and Interactive Techniques (New York, NY, USA, 1994), SIGGRAPH ’94, ACM, pp. 327–334. 2, 4, 7

[BB99] BOGREN H. G., BUONOCORE M. H.: 4D magnetic resonance velocity mapping of blood flow patterns in the aorta in young vs. elderly normal subjects. Journal of Magnetic Resonance Imaging 10, 5 (1999), 861–869. 2

[BBLM10] BARKER A., BOCK J., LORENZ R., MARKL M.: 4D flow MR imaging. MAGNETOM Flash (2010), 46–52. 2

[BPE*15] BUSTAMANTE M., PETERSSON S., ERIKSSON J., ALEHAGEN U., DYVERFELDT P., CARLHALL C. J., EBBERS T.: Atlas-based analysis of 4D flow CMR: automated vessel segmentation and flow quantification. J Cardiovasc Magn Reson 17(2015), 87. 3

[BPMS12] BORN S., PFEIFLE M., MARKL M., SCHEUERMANN G.: Visual 4D MRI blood flow analysis with line predicates. In Pacific Visualization Symposium (PacificVis), 2012 IEEE (Feb 2012), pp. 105–112. 1, 2

[Buo98] BUONOCORE M. H.: Visualizing blood flow patterns using streamlines, arrows, and particle paths. Magn Reson Med 40, 2 (Aug 1998), 210–226. 2

[CG00] CIPOLLA R., GIBLIN P.: Visual Motion of Curves and Surfaces. Cambridge University Press, New York, NY, USA, 2000. 2, 3

[DFRS03] DECARLO D., FINKELSTEIN A., RUSINKIEWICZ S., SANTELLA A.: Suggestive Contours for Conveying Shape. ACM Transactions on Graphics (Proc. SIGGRAPH) 22, 3 (July 2003), 848–855. 3

[ECD10] ERIKSSON J., CARLHALL C. J., DYVERFELDT P., ENGVALL J., BOLGER A. F., EBBERS T.: Semi-automatic quantification of 4D left ventricular blood flow. J Cardiovasc Magn Reson 12 (2010), 9. 2

[GNKP10] GASTEIGER R., NEUGEBAUER M., KUBISCH C., PREIM B.: Adapted Surface Visualization of Cerebral Aneurysms with Embedded Blood Flow Information. In Eurographics Workshop on Visual Computing for Biology and Medicine (2010), Bartz D., Botha C., Hornegger J., Machiraju R., Wiebel A., Preim B., (Eds.), The Eurographics Association. 2

[HEWK03] HEIBERG E., EBBERS T., WIGSTROM L., KARLSSON M.: Three-dimensional flow characterization using vector pattern matching. IEEE Transactions on Visualization and Computer Graphics 9, 3 (July 2003), 313–319. 2

[HSU*10] HEIBERG E., SJOGREN J., UGANDER M., CARLSSON M., ENGBLOM H., ARHEDEN H.: Design and validation of Segment–freely available software for cardiovascular image analysis. BMC Med Imaging 10 (2010), 1. 2

[InV15] INVIWO: InViWo Overview, 2015. 2

[KGG*12] KRISHNAN H., GARTH C., GUHRING J., GULSUN M. A., GREISER A., JOY K. I.: Analysis of time-dependent flow-sensitive PC-MRI data. IEEE Trans Vis Comput Graph 18, 6 (Jun 2012), 966–977. 2

[KYW*00] KILNER P. J., YANG G.-Z., WILKES A. J., MOHIADDIN R. H., FIRMIN D. N., YACOUB M. H.: Asymmetric redirection of flow through the heart. Nature 404, 6779 (Apr 2000), 759–761. 1

[MCA*03] MARKL M., CHAN F. P., ALLEY M. T., WEDDING K. L., DRANEY M. T., ELKINS C. J., PARKER D. W., WICKER R., TAYLOR C. A., HERFKENS R. J., PELC N. J.: Timeresolved three-dimensional phase-contrast MRI. J Magn Reson Imaging 17, 4 (Apr 2003), 499–506. 2

[MKE11] MARKL M., KILNER P. J., EBBERS T.: Comprehensive 4D velocity mapping of the heart and great vessels by cardiovascular magnetic resonance. Journal of Cardiovascular Magnetic Resonance 13, 1 (2011), 1–22. 2

[MPSS05] MALLO O., PEIKERT R., SIGG C., SADLO F.: Illuminated lines revisited. In Visualization, 2005. VIS 05. IEEE (Oct 2005), pp. 19–26. 2, 4

[NJB*11] NEUGEBAUER M., JANIGA G., BEUING O., SKALEJ M., PREIM B.: Anatomy-Guided Multi-Level Exploration of Blood Flow in Cerebral Aneurysms. Computer Graphics Forum 30, 3 (2011), 1041–1050. 2

[Pho75] PHONG B. T.: Illumination for Computer Generated Pictures. Commun. ACM 18, 6 (June 1975), 311–317. 4

[SAG*14] STANKOVIC Z., ALLEN B. D., GARCIA J., JARVIS K. B., MARKL M.: 4D flow imaging with MRI. Cardiovascular Diagnosis and Therapy 4, 2 (2014). 1

[SGSM08] SALZBRUNN T., GARTH C., SCHEUERMANN G., MEYER J.: Pathline predicates and unsteady flow structures. The Visual Computer 24, 12 (2008), 1039–1051. 1, 2, 3

[SS06] SALZBRUNN T., SCHEUERMANN G.: Streamline Predicates. IEEE Transactions on Visualization and Computer Graphics 12, 6 (Nov 2006), 1601–1612. 1, 2

[STH*09] SHI K., THEISEL H., HAUSER H., WEINKAUF T., MATKOVIC K., HEGE H.-C., SEIDEL H.-P.: Topology-Based Methods in Visualization II. Springer Berlin Heidelberg, Berlin, Heidelberg, 2009, ch. Path Line Attributes - an Information Visualization Approach to Analyzing the Dynamic Behavior of 3D Time-Dependent Flow Fields, pp. 75–88. 2

[vPBB*10] VAN PELT R., BESCOS J. O., BREEUWER M., CLOUGH R. E., GROLLER M. E., TER HAAR ROMENIJ B., VILANOVA A.: Exploration of 4D MRI Blood Flow using Stylistic Visualization. IEEE Transactions on Visualization and Computer Graphics 16, 6 (Nov 2010), 1339–1347. 2

[vPBB*11] VAN PELT R., BESCOS J. O., BREEUWER M., CLOUGH R. E., GROLLER M. E., TER HAAR ROMENIJ B., VILANOVA A.: Interactive Virtual Probing of 4D MRI Blood-Flow. IEEE Transactions on Visualization and Computer Graphics 17, 12 (Dec 2011), 2153–2162. 2

[Wor15] WORLD HEALTH ORGANIZATION: Global Health Observatory visualizations, Causes of death - Ten leading causes of death, 2012, 2015. 1

Citations in Crossref